2025年5月11日 1:32 星期日
  • 网站首页
  • 期刊简介
  • 投稿指南
    投稿指南
    论文模版
    著作权许可及转让声明
  • 编委会
    植物遗传资源学报编委会
    青年编委
    主编简介
  • OA政策
    OA政策
    情况通报
    高被引论文
  • 出版伦理
    出版伦理声明
  • 遗传资源分会
    遗传资源分会简介
    委员会
    活动公告
    成为会员
  • 欢迎订阅
  • 联系我们
  • English
  • 微信公众号
首页 > 过刊浏览>2024年第25卷第12期 >2042-2057. DOI:10.13430/j.cnki.jpgr.11-20240409002 优先出版
PDF HTML阅读 XML下载 导出引用 引用提醒
甘蓝型油菜苗期地上部7种矿质元素含量的全基因组关联分析
DOI:
10.13430/j.cnki.jpgr.11-20240409002
CSTR:
作者:
  • 鲁金春子

    鲁金春子

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 陈敬东

    陈敬东

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 余忆

    余忆

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 薛天源

    薛天源

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 程苗

    程苗

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 戴希刚

    戴希刚

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 曾长立

    曾长立

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 万何平

    万何平

    江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
作者单位:

江汉大学生命科学学院/湖北省汉江流域特色生物资源保护开发与利用工程技术研究中心,武汉 430056

作者简介:

油菜矿质元素含量遗传,E-mail :lujchz16@lzu.edu.cn

通讯作者:

曾长立,研究方向为植物营养生理与逆境生理、珍稀濒危植物资源保护与利用,E-mail:zengchangli@jhun.edu.cn
万何平,研究方向为油菜耐盐碱遗传,E-mail:wanheping@jhun.edu.cn

中图分类号:

基金项目:

农业生物育种国家科技重大专项(2022ZD04010);国家自然科学基金(U22A20469);江汉大学一流学科专项(2022XKZX17)


Genome-Wide Association Study of Seven Mineral Element Contents in the Aerial Parts of Brassica napus Seedlings
Author:
  • LU Jingchunzi

    LU Jingchunzi

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • CHEN Jingdong

    CHEN Jingdong

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • YU Yi

    YU Yi

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • XUE Tianyuan

    XUE Tianyuan

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • CHENG Miao

    CHENG Miao

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • DAI Xigang

    DAI Xigang

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • ZENG Changli

    ZENG Changli

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
  • WAN Heping

    WAN Heping

    College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056
    在期刊界中查找
    在百度中查找
    在本站中查找
Affiliation:

College of Life Sciences,Jianghan University/Hubei Engineering Research Center for Conservation,Development and Utilization of Characteristic Biological Resources in Hanjiang River Basin,Wuhan 430056

Fund Project:

Foundation projects: Agricultural Biological Breeding National Major Science and Technology Project (2022ZD04010);National Natural Science Foundation of China (U22A20469); Jianghan University First-Class Discipline Program (2022XKZX17)

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献 [37]
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    矿物质元素含量是评估饲草品质和开展品质育种的重要指标。近年来,油菜作为一种优质高产饲料来源,在缓解我国饲料原料短缺方面发挥了重要作用。本研究旨在揭示油菜核心种质中主要矿质元素的遗传变异情况,为选育富含矿质营养元素的饲料油菜提供支持。通过对272份油菜核心种质进行水培处理,并利用电感耦合等离子体发射光谱仪(ICP-OES)测定甘蓝型油菜地上部分中K、Ca、Na、Mg、Fe、Zn、Cu 7种主要矿质元素的含量。利用全基因组关联分析对其中具有重测序数据的261份油菜种质进行分析,筛选出与矿质元素含量显著关联的分子标记,并预测相关的候选基因。研究发现,矿质元素含量在不同种质中存在显著变异。通过主成分分析将7个矿质元素指标转化为3个新指标,累计贡献率为68.479%。部分矿质元素间存在显著的相关性。部分种质材料在多种矿质元素含量上表现出极端值。本研究共定位到134个与矿质元素含量相关的SNP位点,预测到14个候选基因,该研究为富含矿质元素油菜的选育和新种质创制提供了重要依据。

    关键词:ICP-OES;油菜;矿质元素;全基因组关联分析
    Abstract:

    The content of mineral elements is a crucial indicator for evaluating forage quality and breeding. In recent years, rapeseed has become a valuable high-yield forage source, playing a key role in alleviating the shortage of feed resources in China. This study aimed to reveal the genetic variation of major mineral nutrients in the core germplasm of Brassica napus and to support the breeding of mineral-rich rapeseed. We evaluated the phenotypic variation in the contents of K, Ca, Na, Mg, Fe, Zn, and Cu in 272 core germplasms of B. napus using ICP-OES after hydroponic treatment. Through GWAS, we identified molecular markers significantly associated with the content of these minerals and predicted related candidate genes. The results showed significant variation in mineral content among different germplasms, and principal component analysis transformed the seven mineral indicators into three new indicators, with a cumulative contribution rate of 68.479%. Some significant positive and negative correlations were found between different minerals; some germplasms exhibited extreme values for multiple minerals. A total of 134 SNPs related to mineral content were identified, and 14 candidate genes were predicted. This study provides important insights for the breeding and creation of new germplasm rich in mineral nutrients.

    Key words:ICP-OES;Brassica napus;mineral elements;genome-wide association analysis
    参考文献
    [1] 孟春花, 张建丽, 钱勇, 王飞, 石祖梁, 仲跻峰. 油菜秸秆饲料化利用的研究进展.江苏农业科学, 2021, 49(16): 26-31Meng C H, Zhang J L, Qian Y, Wang F, Shi Z L, Zhong J F. Research progress on forage utilization of rape straw. Jiangsu Agricultural Sciences, 2021, 49(16): 26-31
    [2] Kalaitzandonakes N, Phillips P W, Wesseler J, Smyth S J. The coexistence of genetically modified, organic and conventional foods. Natural Resource Management and Policy, 2016, 49: 1-11
    [3] Thomas C L, Alcock T D, Graham N S, Hayden R, Matterson S, Wilson L, Young S D, Dupuy P J, White J P, Hammond J P, Danku J M, Salt D E, Sweeney A, Bancroft I, Broadley M R. Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit. BMC Plant Biology, 2016, 16(1): 214
    [4] 李纯, 傅廷栋, 杨小牛. 春播油菜绿肥试验简报. 湖北农业科学, 1987(1): 10-11Li C, Fu T D, Yang X N. Brief report of spring sowing rape green fertilizer test. Hubei Agricultural Sciences, 1987(1): 10-11
    [5] 刁志成, 曲扬华, 刘策, 高月锋, 罗海玲. 饲用油菜混合青贮对湖羊屠宰性能及肉品质的影响. 中国畜牧兽医, 2018, 45(6): 1564-1570Diao Z C, Qu Y H, Liu C, Gao Y F, Luo H L. Effects of forage rape mixed silage on slaughter performance and meat quality of Hu sheep. China Animal Husbandry and Veterinary, 2018,45 (6): 1564-1570
    [6] 牟海日, 王春朋, 胡立艳. 辽宁地区种植国外饲料油菜的试验报告. 中国奶牛, 2012(3): 9-11Mu H R, Wang C P, Hu L Y. Experimental report on cultivation of foreign feed rape in Liaoning area. Chinese Cow, 2012(3): 9-11
    [7] 李桂花, 张建峰, 梅勇, 韦东普, 杨俊诚. 盐碱胁迫下油菜对磷元素的吸收. 核农学报, 2007, 21(5): 498-501Li G H, Zhang J F, Mei Y, Wei D P, Yang J C. Phosphorus uptake in rapeseed under salt-alkali stress. Journal of Nuclear Agronomy, 2007, 21(5): 498-501
    [8] 吴静璇, 翟羽佳, 廖秀冬, 张丽阳, 李素芬, 吕林. 饲粮钙和非植酸磷水平对肉仔鸡生长性能和血清指标的影响. 中国畜牧杂志, 2023, 59(9): 264-268Wu J X, Zhai Y J, Liao X D, Zhang L Y, Li S F, Lv L. Effects of dietary calcium and non-phytate phosphorus levels on growth performance and serum parameters of broiler chickens. Chinese Journal of Animal Science, 2023, 59(9): 264-268
    [9] 汲全柱. 动物饲料添加二甲酸钾在影响畜禽生长性能及替代抗生素中的作用. 新农业, 2021(23): 55-56Ji Q Z. Effect of adding potassium diformate to animal feed on the growth performance of livestock and poultry and replacing antibiotics. New Agriculture, 2021(23): 55-56
    [10] 柴明娜, 王婷, 朱志强, 黄雪洁, 韩冰. 刈青燕麦饲草全株及茎叶穗的5种矿质元素含量分析. 河北农业科学, 2023, 27(4):31-36, 55Chai M N, Wang T, Zhu Z Q, Huang X J, Han B. Analysis on the content of 5 mineral elements in the whole plant and stem, leaf and ear of the forage grass of oats. Hebei Agricultural Sciences,2023,27(4):31-36, 55
    [11] 孔雨昕, 马喜波, 王桂芹. 铁的生物学功能及其在鱼类中的应用研究进展. 饲料工业, 2024, 45(8): 56-63Kong Y X, Ma X B, Wang G Q. Research progress on biological function of iron and its application in fish. Feed Industry, 2024, 45(8): 56-63
    [12] Suttle N. Mineral nutrition of livestock. 4th edn. Wallingford: CABI Digital Library, 2010: 540-554
    [13] 康金涛, 刘昆鹏, 杨闯, 全成滔, 戴成, 马朝芝. 油菜苔和常见蔬菜ICP-MS离子组分分析与评价. 南京农业大学学报, 2023, 46(3): 454-463Kang J T, Liu K P, Yang C, Quan C T, Dai C, Ma C Z. Analysis and evaluation of ionic components detected by ICP-MS in rapeseed bolting and common vegetables. Journal of Nanjing Agricultural University, 2023, 46(3): 454-463
    [14] 胡文诗, 李银水, 顾炽明, 代晶, 谢立华, 李小勇, 秦璐, 廖星. 不同油菜品种产量与含油量形成的矿质营养调控研究. 中国油料作物学报, 2023, 45(4): 756-765Hu W S, Li Y S, Gu Z M, Dai J, Xie L H, Li X Y, Qin L, Liao X. Regulation of mineral nutrients on seed yield and oil content formation in different oilseed rape cultivars. Chinese Journal of Oil Crop Sciences, 2023, 45(4): 756-765
    [15] Wu D, Tanaka R, Li X, Ramstein G P, Cu S, Hamilton J P, Buell C R, Stangoulis J, Rocheford T, Gore M A. High-resolution genome-wide association study pinpoints metal transporter and chelator genes involved in the genetic control of element levels in maize grain. G3 (Bethesda), 2021, 11(4): jkab059
    [16] Chen W, Li X, Zhang X, Chachar Z, Lu C, Qi Y, Chang H, Wang Q. Genome-wide association study of trace elements in maize kernels. BMC Plant Biology, 2024, 24(1): 724
    [17] Alcock T D, Havlickova L, He Z, Bancroft I, White P J, Broadley M R, Graham N S. Identification of candidate genes for calcium and magnesium accumulation in Brassica napus L. by Association Genetics. Frontiers in Plant Science, 2017, 8: 1968
    [18] Tang S, Zhao H, Lu S, Yu L, Zhang G, Zhang Y, Yang Q Y, Zhou Y, Wang X, Ma W, Xie W, Guo L. Genome- and transcriptome-wide association studies provide insights into the genetic basis of natural variation of seed oil content in Brassica napus. Molecular Plant, 2021, 14(3): 470-487
    [19] Chang C C, Chow C C, Tellier L C, Vattikuti S, Purcell S M, Lee J J. Second-generation PLINK: Rising to the challenge of larger and richer datasets. Gigascience, 2015, 4: 7
    [20] Yang J, Lee S H, Goddard M E, Visscher P M. GCTA: A tool for genome-wide complex trait analysis. American Journal of Human Genetics, 2011, 88(1) :76-82
    [21] Zhou X, Stephens M. Genome-wide efficient mixed-model analysis for association studies. Nature Genetics, 2012, 44(7): 821-824
    [22] Shen C, Yuan J, Ou X, Ren X, Li X. Genome-wide identification of alcohol dehydrogenase (ADH) gene family under waterlogging stress in wheat (Triticum aestivum). PeerJ. 2021, 9: e11861
    [23] Jin Y, Zhang C, Liu W, Tang Y, Qi H, Chen H, Cao S. The alcohol dehydrogenase gene family in melon (Cucumis melo L.): Bioinformatic analysis and expression patterns. Frontiers in Plant Science, 2016, 7: 670
    [24] Ryuichi T, Yasuhiro I, Hugo S. The OsHMA2 transporter is involved in root-to-shoot translocation of Zn and Cd in rice. Plant, Cell & Environment, 2012, 35(11): 1948-1957
    [25] Dennison K L, Robertson W R, Lewis B D, Hirsch R E, Sussman M R, Spalding E P. Functions of AKT1 and AKT2 potassium channels determined by studies of single and double mutants of Arabidopsis. Plant Physiology, 2001, 127(3): 1012-1019
    [26] 王琪, 许志茹, 陈瑾元, 张双, 黄佳欢, 刘关君. 杨树重金属相关异戊二烯化植物蛋白(HIPPs)基因的鉴定及表达分析. 植物研究, 2019, 39(6): 935-946Wang Q, Xu Z R, Chen J Y, Zhang S, Huang J H, Liu G J. Identification and expression analysis of heavy metal-associated isoprene plant protein (HIPPs) genes in poplar. Plant Research, 2019, 39(6): 935-946
    [27] 吴一凡. 拟南芥BRCA1基因在干旱胁迫应答中的功能分析. 长春: 东北师范大学, 2019Wu Y F. Functional analysis of BRCA1 gene in Arabidopsis thaliana in response to drought stress. Changchun: Northeast Normal University, 2019
    [28] 刘敬婧. 拟南芥RING-finger家族成员RHF1a和RHF2a的功能研究. 北京: 北京大学, 2007Liu J J. Functional study of RHF1a and RHF2a members of the Arabidopsis RING-finger family. Beijing: Peking University, 2007
    [29] Plinio G. The prolific ATL family of RING-H2 ubiquitin ligases. Plant Signaling & Behavior, 2012, 7(8): 1014-1021
    [30] 刘萍, 张林, 王涛, 王婧泽, 陈燕萍, 吴宇瑶, 龚永会, 秦利军, 代文东. 饲料油菜粗蛋白含量及其氨基酸组成. 草业科学, 2023, 40(12): 3150-3162Liu P, Zhang L, Wang T, Wang J Z, Chen Y P, Wu Y Y, Gong Y H, Qin L J, Dai W D. Crude protein content and amino acid composition of feed rape. Pratacultural Science, 2023, 40(12): 3150-3162
    [31] 张占琴, 闫紫薇, 杨相昆, 桑志勤. 新疆地区麦后复种饲料油菜品比试验. 新疆农垦科技, 2020, 43(8): 3-6Zhang Z Q, Yan Z W, Yang X K, Sang Z Q. Experiment on ratio of forage rape to multiple cropping after wheat in Xinjiang region. Xinjiang Land Reclamation Science and Technology, 2020, 43(8): 3-6
    [32] 王洪超, 刘大森, 刘春龙, 陆欣春, 魏巍, 王秀秀. 饲料油菜及其饲用价值研究进展.土壤与作物, 2016, 5(1): 60-64Wang H C, Liu D S, Liu C L, Lu X C, Wei W, Wang X X. Research progress of forage rape and its feeding value. Soil and Crops, 2016, 5(1): 60-64
    [33] 杨雪贞, 许华森, 张月萌, 马文奇, 孙志梅. 河北省主栽山药品种矿质养分累积及矿质营养品质差异. 植物营养与肥料学报, 2022, 28(9): 1734-1744Yang X Z, Xu H S, Zhang Y M, Ma W Q, Sun Z M. Mineral nutrient accumulation and mineral nutrient quality difference of main yam varieties in Hebei province. Journal of Plant Nutrition and Fertilizer, 2019, 28(9): 1734-1744
    [34] 曾亚文, 刘家富, 汪禄祥, 申时全, 李自超, 王象坤, 文国松, 杨忠义. 云南稻核心种质矿质元素含量及其变种类型. 中国水稻科学, 2003, 17(1) :26-31Zeng Y W, Liu J F, Wang L X, Shen S Q, Li Z C, Wang X K, Wen G S, Yang Z Y. Mineral element content and variety types of Yunnan rice core germplasm. Chinese Rice Science, 2003, 17(1): 26-31
    [35] 万何平, 何冰冰, 陈敬东, 戢强强, 曾长立. 一种高通量鉴定甘蓝型油菜耐低氮种质的方法及其应用. 江苏农业科学, 2021, 49(19): 78-83Wan H P, He B B, Chen J D, Ji Q Q, Zeng C L. A high-throughput method for identification of low-nitrogen-tolerant germplasm of Brassica napus and its application. Jiangsu Agricultural Sciences, 2021, 49(19): 78-83
    [36] Douvris C, Vaughan D, Bussan D, Bartzas G, Thomas R. How ICP-OES changed the face of trace element analysis: Review of the global application landscape. Science of the Total Environment, 2023, 905: 167242
    [37] 万何平. 甘蓝型油菜苗期耐盐相关性状的全基因组关联分析. 武汉: 华中农业大学, 2019Wan H P. Genome-wide association analysis of salt-tolerant traits in Brassica napus seedlings. Wuhan: Huazhong Agricultural University, 2019
    相似文献
    引证文献
    网友评论
    网友评论
    分享到微博
    发 布
引用本文

鲁金春子,陈敬东,余忆,等.甘蓝型油菜苗期地上部7种矿质元素含量的全基因组关联分析[J].植物遗传资源学报,2024,25(12):2042-2057.

复制
分享

微信扫一扫:分享

微信里点“发现”,扫一下

二维码便可将本文分享至朋友圈。

文章指标
  • 点击次数:71
  • 下载次数: 315
  • HTML阅读次数: 45
  • 引用次数: 0
历史
  • 收稿日期:2024-04-09
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2024-12-06
  • 出版日期:
文章二维码
您是第5828226位访问者
ICP:京ICP备09069690号-23
京ICP备09069690号-23
植物遗传资源学报 ® 2025 版权所有
技术支持:北京勤云科技发展有限公司
请使用 Firefox、Chrome、IE10、IE11、360极速模式、搜狗极速模式、QQ极速模式等浏览器,其他浏览器不建议使用!