小麦TILLING分析中CELⅠ酶切及PCR反应体系的优化
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Establishment and Optimization of CEL I-based TILLING for Wheat
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    摘要:

    在小麦中建立稳定的基于CEL I酶切的目的基因突变位点检测技术,有助于高通量鉴定目的基因片段的点突变及提高突变检测效率。本研究以冬小麦品种新麦18空间诱变SP2代群体为材料,以小麦糯质基因Waxy为目标片段,通过优化基因组DNA提取方法、调整PCR反应体?系中dNTP、Mg2 及引物浓度、改变目标片段CEL I酶切缓冲液成分,以及调整纯化过程中的空气相对湿度等方式,优化了小麦TILLING技术体系。在利用PVP-40法提取DNA过程中,研磨器振动频率提高到30/s,KAc溶液的反应时间延伸为20min时,基因组DNA质量和纯度最佳;在设定的浓度范围内dNTP和Mg2 浓度对产物影响差异不明显,均能高效扩增出目的条带。引物浓度对产物影响差异显著,最佳引物浓度为0.4umol L-1。20祃酶切体系中,最佳CEL I酶浓度为0.1U且利用超纯水代替CEL I缓冲液。最终在小麦中建立起了基于CEL I酶切的高通量TILLING筛选技术体系。

    Abstract:

    CEL I-based TILLING (Targeting Induced Local Lesions In Genomes) platform is very useful for high throughput identification of point mutations within targeted genes and improvement of mutation-detected efficiency in wheat. The space-mutated Xinmai 18 (Triticum aestivum L.) SP2 population was used with one SNP of Waxy gene in the population as a positive control. The TILLING protocol for wheat was optimized through improving the method of genomic DNA extraction, the concentration of dNTP, Mg2 ,primers and CEL I buffer as well as experimental environment air humidity. It was found that through raising the grinding frequence to 30/s and prolonging the reaction time of KAc to 20min in genomic DNA extraction, the quality and purification of DNA were the best. The concentration of both dNTP and Mg2 did not have any influence on PCR products within the set ranges, while primer played an important role in PCR products and the best concentration was 0.4 umol L-1. Optimum amount of CEL I enzyme was 0.1U in a 20 祃 of digestion reaction system and ultrapure water substituting for CEL I buffer was the best reaction condition. A CEL I-based TILLING technique for wheat was established and optimized.

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潘 娜,郭会君,赵世荣,等.小麦TILLING分析中CELⅠ酶切及PCR反应体系的优化[J].植物遗传资源学报,2012,13(5):830-837.

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  • 收稿日期:2011-10-19
  • 最后修改日期:2012-06-25
  • 录用日期:2012-07-03
  • 在线发布日期: 2012-09-14
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