2025年5月23日 9:05 星期五
  • 网站首页
  • 期刊简介
  • 投稿指南
    投稿指南
    论文模版
    著作权许可及转让声明
  • 编委会
    植物遗传资源学报编委会
    青年编委
    主编简介
  • OA政策
    OA政策
    情况通报
    高被引论文
  • 出版伦理
    出版伦理声明
  • 遗传资源分会
    遗传资源分会简介
    委员会
    活动公告
    成为会员
  • 欢迎订阅
  • 联系我们
  • English
  • 微信公众号
首页 > 过刊浏览>2022年第23卷第3期 >787-799. DOI:10.13430/j.cnki.jpgr.20211218001 优先出版
PDF HTML阅读 XML下载 导出引用 引用提醒
大豆 DELLA 基因单倍型与花期关联分析及基因编辑靶点鉴定
DOI:
10.13430/j.cnki.jpgr.20211218001
CSTR:
作者:
  • 贺米兰

    贺米兰

    广州大学生命科学学院
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 李海洋

    李海洋

    广州大学生命科学学院
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 黄泽荣

    黄泽荣

    广州大学生命科学学院
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 孔凡江

    孔凡江

    广州大学生命科学学院
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 赵晓晖

    赵晓晖

    广州大学生命科学学院
    在期刊界中查找
    在百度中查找
    在本站中查找
作者单位:

广州大学生命科学学院

作者简介:

通讯作者:

中图分类号:

基金项目:

国家自然科学基金项目(32072013)


Association Analysis of Soybean DELLA Gene Haplotypes with Flowering Time and Identification of Their Gene-editing Target Sites
Author:
  • HE Mi-lan

    HE Mi-lan

    School of Life Sciences,Guangzhou University
    在期刊界中查找
    在百度中查找
    在本站中查找
  • LI Hai-yang

    LI Hai-yang

    School of Life Sciences,Guangzhou University
    在期刊界中查找
    在百度中查找
    在本站中查找
  • HUANG Ze-rong

    HUANG Ze-rong

    School of Life Sciences,Guangzhou University
    在期刊界中查找
    在百度中查找
    在本站中查找
  • KONG Fan-jiang

    KONG Fan-jiang

    School of Life Sciences,Guangzhou University
    在期刊界中查找
    在百度中查找
    在本站中查找
  • ZHAO Xiao-hui

    ZHAO Xiao-hui

    School of Life Sciences,Guangzhou University
    在期刊界中查找
    在百度中查找
    在本站中查找
Affiliation:

School of Life Sciences,Guangzhou University

Fund Project:

National Natural Science Foundation of China (32072013)

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献 [36]
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    DELLA 蛋白作为赤霉素负调控因子参与植物开花期调控。与拟南芥 DELLA 蛋白同源比对,研究发现大豆具有 8 个 DELLA 基因,其中 GmGAI3a 只有 GRAS 结构域,其他 7 个 DELLA 蛋白均具有 DELLA 结构域和 GRAS 结构域。对 8 个 大豆 DELLA 基因在 424 份材料的自然群体中的单倍型与开花期进行关联分析,发现 DELLA 基因早花型自然变异已经应用 于我国中高纬度地区,推测大豆 DELLA 基因负向调控开花。利用 CRISPR/Cas9 技术,在大豆发根系统中验证靶点的编辑效 率,成功鉴定出 7 个 DELLA 基因的有效靶点,为进一步获得稳定遗传转化的大豆 DELLA 突变体及解析基因功能提供了重要 的靶点信息与理论基础。

    关键词:大豆;DELLA;单倍型;花期关联分析;CRISPR/Cas9
    Abstract:

    DELLA proteins are known as negative regulators of gibberellin involved in plant flowering. Eight DELLA genes were identified in soybean genome by sequence alignment with Arabidopsis thaliana(L.) Heynh. DELLA orthologs GmGAI3a has only one GRAS domain,and the other seven DELLA proteins have both DELLA domain and GRAS domain. By performing gene-based association analysis of flowering time in natural population,soybean DELLA haplotypes associating with early-flowering have been detected in soybean accessions collected from the middle and high latitude of China,speculating DELLA genes as negative factors in regulating flowering. CRISPR/Cas9-based editing in soybean hairy root system revealed the editing efficiency at the target sites. Identification of the CRISPR/Cas9 targets of seven DELLA genes provided references for generating stable transgenic DELLA mutants for deciphering their biological functions.

    Key words:soybean;DELLA;haplotype;association analysis of flowering time;CRISPR/Cas9
    参考文献
    [1]Graham P H and Vance C P. Legumes: Importance and Constraints to Greater Use. Plant Physiology, 2003, 131(3) : 872-877.
    [2]Li Y H, Guan R X, Liu Z X, Ma Y S, Wang L X, Li L H, Lin F Y, Luan W J, Chen P Y, Yan Z, Guan Y, Zhu L, Ning X C, Smulders M J M, Li W, Piao R H, Cui Y H, Yu Z M, Guan M, Chang R Z, Hou A F, Shi A N, Zhang B, Zhu S L, Qiu L J. Genetic structure and diversity of cultivated soybean [Glycine max (L.) Merr.] landraces in China. Theoretical and Applied Genetics, 2008, 117(6) : 857-871.
    [3]Pysh L D, Wysocka-Diller J W, Camilleri C, Bouchez D, Benfey P N. The GRAS gene family in Arabidopsis: Sequence characterization and basic expression analysis of the SCARECROWLIKE genes. The Plant Journal, 1999, 18: 111–119.
    [4]Bolle C. The role of GRAS proteins in plant signal transduction and development. Planta, 2004, 218: 683–692.
    [5]Griffiths J, Murase K, Rieu I, Zentella R, Zhang Z L, Powers S J, Gong F, Phillips A L, Hedden P, Sun T P, Thoma S G. Genetic Characterization and Functional Analysis of the GID1 Gibberellin Receptors in Arabidopsis. The Plant Cell, 2006, 18(12) : 3399-3414.
    [6]Masatoshi N, Asako S, Yoshiyuki T, Young C K, Seung H P, Miyako U T, Hiroyuki S, Etsuko K, Satoshi I, Masatomo K, Tatsuya M, Makoto M, Isomaro Y. Identification and characterization of Arabidopsis gibberellin receptors. The Plant Journal, 2006, 46(5) : 880-889.
    [7]Richards D E, King K E, Tahar A A, Harberd N P. How gibberellin regulates plant growth and development: A molecular genetic analysis of gibberellin signaling. Annual Review of Plant Physiology & Plant Molecular Biology, 2001, 52 (52) : 67-88.
    [8]Kohji M, Yoshinori H, Tai P S, Toshio H. Gibberellin-induced DELLA recognition by the gibberellin receptor GID1. Nature: International weekly journal of science, 2008, 456(7221) : 459-463.
    [9]Davière J M and Achard P. Gibberellin signaling in plants. Development:Cambridge, England, 2013, 140(6) : 1147-1151.
    [10]Dill A and Sun T P. Synergistic de-repression of gibberellin signaling by removing RGA and GAI function in Arabidopsis thaliana. Genetics, 2001, 159(2) : 777-785.
    [11]King K E, Moritz T, Harberd N P. Gibberellins are not required for normal stem growth in Arabidopsis thaliana in the absence of GAI and RGA. Genetics, 2001, 159(2) : 767-776.
    [12]Lee S, Cheng H, King K E, Wang W, He Y, Hussain A, Lo J, Harberd N P, Peng J. Gibberellin regulates Arabidopsis seed germination via RGL2, a GAI/RGA-like gene whose expression is up-regulated following imbibition. Genes & Development, 2002, 16(5) : 646-658 .
    [13]Tyler L, Thomas S G, Hu J, Dill A, Alonso J M, Ecker J R, Sun T P. DELLA proteins and gibberellin-regulated seed germination and floral development in Arabidopsis. Plant Physiolgy, 2004, 135(2) : 1008-1019.
    [14]Cheng H, Qin L, Lee S, Fu X, Richards D E, Cao D, Luo D, Harberd N P, Peng J. Gibberellin regulates Arabidopsis floral development via suppression of DELLA protein function. Development (Cambridge, England), 2004, 131(5) : 1055-1064.
    [15]Foster T, Kirk T, Jones W T, Allan A C, Espley R, Karunairetnam S, Rakonjac J. Characterisation of the DELLA subfamily in apple (Malus x domestica Borkh.). Tree Genetics & Genomes, 2007,3(3) : 187-197.
    [16]An J, Hou J, Li C, Wang C X, Xia H, Zhao C Z, Li C S, Zheng Y X, Zhao Y X, Wang X J. Cloning and expression analysis of four DELLA genes in peanut. Russian Journal of Plant Physiology, 2015, 62(1) : 116-126.
    [17]Hu M Y, Luo M, Xiao Y H, Li X B, Tan K L, Hou L, Dong J, Li D M,Song S Q, Zhao J, Zang Z L,Li B L, Pei Y. Brassinosteroids and Auxin Down-Regulate DELLA Genes in Fiber Initiation and Elongation of Cotton. Agricultural Sciences in China , 2011, 10(08) : 1168-1176.
    [18]Lu S J, Dong L D, Fang C, Liu S L, Kong L P, Cheng Q, Chen L Y, Su T, Nan H Y, Zhang D, Zhang L, Wang Z J, Yang Y Q, Yu D Y, Liu X L, Yang Q Y, Lin X Y, Tang Y, Zhao X H, Yang X Q, Tian C E, Xie Q G, Li X, Yuan X H, Tian Z X, Liu B H, Weller J L, Kong F J. Stepwise selection on homeologous PRR genes controlling flowering and maturity during soybean domestication. Nature Genetics, 2020, 52(4) : 428-436.
    [19]S Livne, V S Lor, I Nir, N Eliaz, A Aharoni, N E Olszewski, Y Eshed, D Weiss, Uncovering DELLA-independent gibberellin responses by characterizing new tomato procera mutants. The Plant Cell, 2015, 27(6) : 1579–1594.
    [20]Yamaguchi N, Winter C M, Wu M, Kanno Y, Yamaguchi A, Seo M, Wagner D. Gibberellin acts positively then negatively to control onset of flower formation in Arabidopsis. Science, 2014, 344(6184) : 638?641.
    [21]Yu S, Galv?o V C, Zhang Y C, Horrer D, Zhang T Q, Hao Y H, Feng Y Q, Wang S, Schmid M, Wang J W. Gibberellin regulates the Arabidopsis floral transition through miR156-targeted SQUAMOSA promoter binding-like transcription factors. The Plant Cell, 2012, 24(8) : 3320?3332.
    [22]Yan J D, Li X M, Zeng B J, Zhong M, Yang J X, Yang P, Li X, He C S, Lin J Z, Liu X M, Zhao X Y. FKF1 F-box protein promotes flowering in part by negatively regulating DELLA protein stability under long-day photoperiod in Arabidopsis. Journal of Integrative Plant Biology, 2020, 62(11) : 1717-1740.
    [23]Li Y,?Wang H P, Li X L,?Liang G, Yu D Q. Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana. Journal of experimental botany, 2017, 68(11) : 2757-2767.
    [24]Li M Z, An F Y, Li W Y, Ma M D, Feng Y, Zhang X, Guo H W. DELLA proteins interact with FLC to repress flowering transition. Journal of integrative plant biology, 2016, 58(7) : 642-655.
    [25]Achard P, Baghour M, Chapple A, Hedden P, Straeten D V D, Genschik P, Moritz T, Harberd N P. The plant stress hormone ethylene controls floral transition via DELLA-dependent regulation of floral meristem-identity genes, Proceedings of the National Academy of Sciences of the United States of America, 2007, 104(15) : 6484-6489.
    [26]Bao S J, Hua C G, Shen L S, Yu H. New insights into gibberellin signaling in regulating flowering in Arabidopsis. Journal of Integrative Plant Biology, 2020, 62(1) : 118-131.
    [27]Chen K and Gao C. Targeted genome modification technologies and their applications in crop improvements. Plant Cell Reports, 2014, 33(4) : 575-583.
    [28]Marciniak K and Przedniczek K. Gibberellin signaling repressor LlDELLA1 controls the flower and pod development of yellow lupine (lupinus luteus L.).?International Journal of Molecular Sciences,?2020, 21(5), 1815.
    [29]侯智红,吴艳,程群,董利东,芦思佳,南海洋,甘卓然,刘宝辉. 利用CRISPR/Cas9技术创制大豆高油酸突变系. 作物学报, 2019, 45(06): 839-847.
    Hou Z H, Wu Y, Cheng Q, Dong L D, Lu S J, Nan H Y, Gan Z R, Liu B H. Creation of high oleic acid soybean mutation plants by CRISPR/Cas9. Acta Agronomica Sinica, 2019, 45(06) : 839–847 (in Chinese with English abstract).
    [30]曾栋昌,马兴亮,谢先荣,祝钦泷,刘耀光. 植物CRISPR/Cas9多基因编辑载构建和突变分析的操作方法. 中国科学: 生命科学, 2018, 48(07):783-794.
    Zeng D C, Ma X L, Xie X R , Zhu Q L , Liu Y G. A protocol for CRISPR/Cas9-based multi-gene editing and sequence decoding of mutant sites in plants, Scientia Sinica: Vitae, 2018, 48(07) : 783–794 (in Chinese with English abstract).
    [31]Jin Y, Liu H, Luo D X, Yu N, Dong W T, Wang C, Zhang X W, Dai H L, Yang J, Wang E T. DELLA proteins are common components of symbiotic rhizobial and mycorrhizal signalling pathways. Nature Communications, 2016, 7(1) : 119-144.
    [32]Silverstone A L, Ciampaglio C N, Sun T P. The Arabidopsis RGA gene encodes a transcriptional regulator repressing the gibberellin signal transduction pathway. Plant Cell, 1998, 10(2) : 155-169.
    [33]Peng J, Richards D E, Hartley N M, Murphy G P, Devos K M,?Flintham J E,?Beales J,?Fish L J,?Worland A J,?Pelica F,?Sudhakar D,?Christou P,?Snape J W,?Gale M D,?Harberd N P. ‘Green revolution’ genes encode mutant gibberellin response modulators. Nature, 1999, 400(6741) : 256-261.
    [34]Dong L D, Fang C, Cheng Q, Su T, Kou K, Kong L P, Zhang C B, Li H Y, Hou Z H, Zhang Y H, Chen L Y, Yue L, Wang L S, Wang K, Li Y L, Gan Z R, Yuan X H, Weller J L, Lu S J, Kong F J, Liu B H. Genetic basis and adaptation trajectory of soybean from its temperate origin to tropics. Nature communications, 2021, 12(1) : 5445-5445.
    相似文献
    引证文献
    网友评论
    网友评论
    分享到微博
    发 布
引用本文

贺米兰,李海洋,黄泽荣,等.大豆 DELLA 基因单倍型与花期关联分析及基因编辑靶点鉴定[J].植物遗传资源学报,2022,23(3):787-799.

复制
分享

微信扫一扫:分享

微信里点“发现”,扫一下

二维码便可将本文分享至朋友圈。

文章指标
  • 点击次数:644
  • 下载次数: 1743
  • HTML阅读次数: 0
  • 引用次数: 0
历史
  • 收稿日期:2021-12-18
  • 最后修改日期:2022-01-07
  • 录用日期:2022-02-07
  • 在线发布日期: 2022-05-10
  • 出版日期:
文章二维码
您是第5860300位访问者
ICP:京ICP备09069690号-23
京ICP备09069690号-23
植物遗传资源学报 ® 2025 版权所有
技术支持:北京勤云科技发展有限公司
请使用 Firefox、Chrome、IE10、IE11、360极速模式、搜狗极速模式、QQ极速模式等浏览器,其他浏览器不建议使用!