向日葵ARF基因家族鉴定及其在花发育中的功能分析
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西华师范大学生命科学学院西南野生动植物资源保护教育部重点实验室,四川南充 637002

作者简介:

研究方向为植物遗传发育,E-mail:2623126933@qq.com

通讯作者:

邹建,研究方向为植物遗传育种,E-mail:zoujian@cwnu.edu.cn

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基金项目:

四川省自然科学基金(2022NSFSC0163,2023NSFSC0226);西华师范大学博士科研启动专项项目(18Q039);西华师范大学创新团队项目资助(KCXTD2023-7)


Identification of the Sunflower ARF Gene Family and Prediction Analysis of its Function in Flower Development
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Key Laboratory of Southwest China Wildlife Resource Conservation (Ministry of Education), College of Life Science, China West Normal University, Nanchong 637002,Sichuan

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Foundation projects: Sichuan Natural Science Foundation (2022NSFSC0163, 2023NSFSC0226);Doctoral Scientific Research Startup Found of China West Normal University (18Q039); Supported by the Innovation Team Funds of China West Normal University(KCXTD2023-7)

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    摘要:

    生长素响应因子是一类生长素响应转录因子,在花发育调控中发挥重要作用,但其在向日葵花发育中的作用尚未见报道。基于本实验室前期构建的向日葵转录组数据,筛选到39个向日葵ARF基因,分属于5个类群,且同一类群成员具有相似的基因结构、保守结构域和保守基序。组织特异性表达模式分析发现,其中20个ARF基因可能与向日葵花发育调控相关。分析这20个ARF基因在光雾山野生葵(WT)和花分生组织决定与花器官分化缺陷突变体cb1cb1crazy broccoli 1)中的表达差异,发现gene33195gene34899gene58924gene2145gene16681在WT花发育St2至St4时期(花原基起始期、花器官开始形成期和减数分裂期)高水平表达,在花发育后期几乎不表达;它们在cb1中表达水平被上调,且与WT花发育早期峰值水平相当。另一个ARF基因gene70445cb1突变体的整个花发育时期的表达水平均远高于WT。这些结果说明,这6个ARF基因在花分生组织转变和花器官发生中发挥关键作用。启动子顺式作用元件分析发现,这6个基因的启动子区存在多个AP2/ERF、MIKC_MADS和LFY识别元件,说明它们在向日葵花分生组织转变和花器官发生调控中,可能受到AP2/ERF、MIKC_MADS和LFY家族基因的调节。本研究为深入探究向日葵ARF基因在花发育调控中的功能和分子机制提供重要线索,也为向日葵新品种选育提供参考。

    Abstract:

    Auxin response factors (ARFs) are a family of transcription factors that play an important role in flower development through responding to auxin signaling. However, their importance in flower development remains elucidated in sunflower. In this study, 39 ARF family members were identified in sunflower through transcriptome data analysis, and they were categorized into five subfamilies. These members shared similar gene structures, conserved domains and functional motifs. The tissue specific expression pattern analysis showed that 20 ARFs are likely involved in flower development regulation. Through analyzing the transcriptional profiles at various stages during flower development between WT, and the cb1crazy broccoli 1) mutant, which exhibits defects in meristem determinacy and floral organ differentiation, five ARF genes (gene33195, gene34899, gene58924, gene2145 and gene16681) showed significant expression changes during flower development. These genes were found to be highly expressed from St2 to St4 in WT but barely expressed in later stages. Their expression was up-regulated in cb1 mutant, corresponding to the peak level at early stages of flower development in WT. Another ARF gene, gene70445 presented higher expressing levels during whole flower development in cb1 mutants than WT plants. We also found that the promoter regions of these six ARF genes contained cis-acting elements recognized by AP2/ERF, MIKC_MADS and LFY, suggesting that they might be regulated by AP2/ERF, MIKC_MADS and LFY family genes during meristem transformation and floral organogenesis. The obtained results could provide important clue for further exploring the biological function and molecular regulatory mechanisms of ARF genes in flower development of sunflower, becoming valuable in future sunflower varieties breeding.

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引用本文

邓玉萍,王倩,张敏慧,等.向日葵ARF基因家族鉴定及其在花发育中的功能分析[J].植物遗传资源学报,2024,25(11):1967-1979.

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  • 收稿日期:2024-02-23
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  • 在线发布日期: 2024-11-07
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