油茶种仁脂肪酸代谢关键基因的挖掘与分析
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黄冈师范学院生物与农业资源学院,经济林木种质改良与资源综合利用湖北省重点实验室,湖北黄冈,43800

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国家自然科学基金(31660427);湖北省教育厅科学技术研究项目(Q20222903);湖北省中央引导地方科技发展专项(2022BGE229);黄冈师范学院高级别重大项目培育计划项目(204202314304)


Exploration and Analysis of Key Genes Involved in Fatty Acid Metabolism in Camellia oleifera Seeds Kernel
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College of Biology and Agricultural Resources,Huanggang Normal University,Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization

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National Natural Science Foundation of China(31660427);Hubei Provincial Department of Education Science and Technology Research Foundation (Q20222903);Hubei Provincial Central Leading Local Science and Technology Development Special Foundation (2022BGE229); High level Major Project Cultivation Plan Foundation of Huanggang Normal University (204202314304)

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    摘要:

    为挖掘油茶含油量及脂肪酸代谢的关键基因,对三个关键发育时期的油茶种仁进行转录组分析,并对富集的脂肪酸代谢关键基因表达量、含油量和各脂肪酸组分比例进行相关性分析。转录组分析表明,共获得17772个差异表达基因(Differentially expressed genes, DEGs),其中11006个基因上调表达,6766个基因下调表达。GO (Gene Ontology)分析表明,三个比较组共有1302个DEGs富集到195个GO terms,每个比较组特有的DEGs分别富集到14、1和17个GO terms。KEGG分析显示,三个比较组共有DEGs富集在类黄酮生物合成、苯丙烷生物合成、二芳基庚烷和姜酚生物合成、黄酮和黄酮醇生物合成以及谷胱甘肽代谢5条通路中。此外,在脂肪酸合成关键时期的Em0707vsEm1003比较组中,DEGs富集在脂肪酸生物合成、脂肪酸代谢、生物素代谢和丙酮酸代谢4条通路中,其中12个DEGs基因参与脂肪酸代谢通路;进一步测定不同时期种仁含油量和脂肪酸组分,并进行相关性分析表明,ACC、KASIII、PATE、KAT2和SAD基因的表达量与种仁含油量和C18:1n-9c呈显著正相关,KASIII、ACC、PATE和KAT2基因与C16:0呈显著负相关性,可能是调控油茶含油量及脂肪酸代谢相关的关键基因,上述研究为油茶遗传改良提供了科学依据。

    Abstract:

    To explore the key genes involved in oil content and fatty acid metabolism in Camellia oleifera, transcriptome analysis was performed on the kernel of camellia oleifera at three key developmental stages, and correlation analysis was conducted on the expression levels, oil content, and proportion of each fatty acid component of the enriched fatty acid metabolism key genes. Transcriptome analysis showed that 17772 differentially expressed genes (DEGs) were obtained, of which 11006 genes were up-regulated, 6766 genes were down-regulated. GO (Gene Ontology) analysis showed that a total of 1302 DEGs were enriched with 195 GO terms in the three comparative groups, the unique DEGs were enriched with 14, 1, and 17 GO terms in each comparative group, respectively. KEGG analysis showed that the three comparative groups had DEGs enriched in Flavonoid biosynthesis, Phenylpropanoid biosynthesis, Diarylheptanoid and gingerol biosynthesis, and Glutathione metabolism at five pathways. In addition, in the Em0707vsEm1003 comparison group during the critical period of fatty acid synthesis, DEGs were enriched in four pathways of fatty acid biosynthesis, fatty acid metabolism, biotin metabolism and pyruvate metabolism, among which 12 DEGs genes involved in the fatty acid metabolism pathway; further determination of oil content and fatty acid composition in different stages of seed kernels, and correlation analysis showed that the expression levels of ACC, KASIII, PATE, KAT2 and SAD genes were significantly positively correlated with seed oil content and C18:1n-9c, while KASIII, ACC, PATE, and KAT2 genes were significantly negatively correlated with C16:0. They may be key genes regulating oil content and fatty acid metabolism in Camellia oleifera, the above research provides a scientific basis for genetic improvement of Camellia oleifera.

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  • 收稿日期:2024-06-19
  • 最后修改日期:2024-07-14
  • 录用日期:2024-10-18
  • 在线发布日期: 2024-10-18
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