广州大学 生命科学学院/广东省植物适应与分子设计重点实验室
国家自然科学(32272135,32072013)
School of Life Sciences,Guangzhou University/Guangdong Provincial Key Laboratory of Plant Adaptation andMolecular Design
The National Natural Science Foundation of China (General Program, Key Program, Major Research Plan)
油菜素类固醇(BR, brassinosteroid)是参与植物生长和发育过程的植物激素,油菜素内酯不敏感型受体BRI1(brassinosteroid insensive 1)在BR信号通路中起主要作用。大豆(Glycine max (L.) Merr.)在世界粮食和经济作物中占据重要地位,与其他作物不同,大豆可以与根瘤菌形成共生关系,进行生物固氮。但目前GmBRI1在调控大豆生长发育和共生固氮方面的功能尚不明确。因此,鉴定与解析GmBRI1基因家族成员的特征与功能对于揭示BR信号在大豆生长发育中的独特作用至关重要。本研究利用生物信息学方法在大豆基因组中共鉴定出6个GmBRI1基因,非均匀地分布在4条染色体上,氨基酸数量在1136-1211 aa之间,亮氨酸占比最高,均为酸性的稳定蛋白。系统发育分析显示,GmBRI1基因家族可分为3个亚家族,同一亚家族的基因结构和保守基序分布高度相似。共线性分析表明片段复制是GmBRI1基因家族扩张的主要原因。GmBRI1基因家族的启动子上含有丰富的调控大豆光响应、激素响应、逆境响应和生长发育过程的顺式作用元件。GmBRI1的潜在磷酸化位点数量在111-132之间。预测了与GmBRI1互作的蛋白有19个,直接结合的有4个,通过与多种蛋白互作参与到BR信号转导途径中调控多种生物学过程。GmBRI1家族基因在根和根瘤中均表达,而且GmBRI1a、GmBRI1b、GmBRL1a和GmBRL1b在受到根瘤菌侵染后下调表达。本研究为大豆GmBRI1基因的功能研究提供了新的理论依据,并证明了它们在根瘤菌侵染早期发生响应,这为深入了解GmBRI1基因家族在大豆共生结瘤中的功能与分子机制提供了基础信息。
Brassinosteroids ( BRs ) play an important role in plant growth and development, and Brassinosteroid insensive 1 ( BRI1 ) plays a major role in BR signaling pathway. Soybean ( Glycine max ( L. ) Merr. ) is an important food and economic crop in the world. Unlike other crops, soybean can form a symbiotic relationship with rhizobia for biological nitrogen fixation. However, the function of GmBRI1 in regulating soybean growth and symbiotic nitrogen fixation is still unclear. Therefore, identification and analysis of the characteristics and functions of GmBRI1 gene family members are crucial for revealing the unique role of BR signaling in soybean growth and development. In this study, six GmBRI1 family genes were identified by bioinformatics methods in soybean genome, which were non-uniformly distributed on four chromosomes of soybean. The number of amino acids was between 1136-1211 aa, and the proportion of leucine was the highest, all of which were acidic and stable proteins. Phylogenetic analysis showed that the GmBRI1 gene family could be divided into three subfamilies. The gene structure and conserved motif distribution of the same subfamily are highly similar. Synteny analysis showed that fragment replication was the main reason for the expansion of GmBRI1 gene family. The promoter of the GmBRI1 family gene contains abundant cis-acting elements that regulate soybean light response, hormone response, stress response, and growth and development. The number of potential phosphorylation sites of GmBRI1 family genes was between 111-132. The protein interaction network predicted that there were 19 proteins interacting with GmBRI1 and 4 proteins directly binding, which participate in the regulation of various biological processes in the BR signal transduction pathway by interacting with various proteins. The GmBRI1 family genes are expressed in both roots and nodules, and GmBRI1a, GmBRI1b, GmBRL1a and GmBRL1b genes are down-regulated after rhizobia infection. This study provides a new theoretical basis for the functional study of soybean GmBRI1 family genes, and proves that they respond in the early stage of rhizobium infection, which provides basic information for further understanding the function and molecular mechanism of GmBRI1 gene family in soybean symbiotic nodulation.