2025年6月12日 1:00 星期四
  • 网站首页
  • 期刊简介
  • 投稿指南
    投稿指南
    论文模版
    著作权许可及转让声明
  • 编委会
    植物遗传资源学报编委会
    青年编委
    主编简介
  • OA政策
    OA政策
    情况通报
    高被引论文
  • 出版伦理
    出版伦理声明
  • 遗传资源分会
    遗传资源分会简介
    委员会
    活动公告
    成为会员
  • 欢迎订阅
  • 联系我们
  • English
  • 微信公众号
首页 > 过刊浏览>2024年第25卷第10期 >1767-1780. DOI:10.13430/j.cnki.jpgr.20231215003 优先出版
PDF HTML阅读 XML下载 导出引用 引用提醒
花生红色种皮花青素生物合成转录-代谢组学联合分析
DOI:
10.13430/j.cnki.jpgr.20231215003
CSTR:
作者:
  • 张利苹 1

    张利苹

    河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 王俊玲 1

    王俊玲

    河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 李振华 2

    李振华

    濮阳市农林科学院,河南濮阳 457000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 李新畅 3

    李新畅

    承德市农林科学院,河北承德 067000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 王梅 1

    王梅

    河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 王红霞 1

    王红霞

    河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 杨鑫雷 1

    杨鑫雷

    河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001
    在期刊界中查找
    在百度中查找
    在本站中查找
  • 穆国俊 1

    穆国俊

    河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001
    在期刊界中查找
    在百度中查找
    在本站中查找
作者单位:

1.河北农业大学农学院/华北作物种质资源教育部重点实验室/河北种质资源实验室,保定 071001;2.濮阳市农林科学院,河南濮阳 457000;3.承德市农林科学院,河北承德 067000

作者简介:

研究方向为植物种质资源创制与利用,E-mail:2734182026@qq.com

通讯作者:

穆国俊,研究方向为花生种质资源创制与利用,E-mail: mgj99999@126.com
杨鑫雷,研究方向为花生遗传与分子育种, E-mail:peanut@hebau.edu.cn

中图分类号:

基金项目:

河北省现代农业产业技术体系建设专项资金(HBCT2024040201);河北省高等学校科学技术研究项目(ZD2022069);河北省青年拔尖人才资助项目(0602015);河北省重点研发计划项目现代种业科技专项(19226363D);曲阳庄子河太行山农业创新驿站建设项目(903-311718001)


Transcriptomics-Metabolomics Combined Analysis Highlight the Anthocyanin Biosynthesis Mechanism of Red Testa in Peanut(Arachis hypogaea L.)
Author:
  • ZHANG Liping 1

    ZHANG Liping

    Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • WANG Junling 1

    WANG Junling

    Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • LI Zhenhua 2

    LI Zhenhua

    Puyang Academy of Agricultural and Forestry Sciences, Puyang 457000,Henan
    在期刊界中查找
    在百度中查找
    在本站中查找
  • LI Xinchang 3

    LI Xinchang

    Chengde Academy of Agriculture and Forestry Sciences, Chengde 067000, Hebei
    在期刊界中查找
    在百度中查找
    在本站中查找
  • WANG Mei 1

    WANG Mei

    Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • WANG Hongxia 1

    WANG Hongxia

    Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • YANG Xinlei 1

    YANG Xinlei

    Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000
    在期刊界中查找
    在百度中查找
    在本站中查找
  • MU Guojun 1

    MU Guojun

    Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000
    在期刊界中查找
    在百度中查找
    在本站中查找
Affiliation:

1.Agronomy College, Hebei Agricultural University/North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory, Baoding, 071000;2.Puyang Academy of Agricultural and Forestry Sciences, Puyang 457000,Henan;3.Chengde Academy of Agriculture and Forestry Sciences, Chengde 067000, Hebei

Fund Project:

Foundation projects: Hebei Province Modern Agricultural Industrial Technology System Construction Special Fund(HBCT2024040201); Science and Technology Research Project of Colleges and Universities in Hebei Province(ZD2022069); Project of Youth Top Talent Funding in Hebei Province(0602015); Key Project of Science and Technology Research of Modern Seed Industry of the Department of Science and Technology in Hebei Province(19226363D); Project of the Construction of Zhuangzi River Taihang Mountain Agricultural Innovation Station in Quyang(903-311718001)

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献 [42]
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    花生是我国重要的特色出口农产品,在农业发展中占有至关重要的地位。本研究以红珍珠(H)和白珍珠(B)两个花生品种为研究材料,进行转录组学-代谢组学联合分析。在开花后第30天和第45天,红珍珠种皮和白珍珠种皮色差值(L值、a值、b值)及其花青素含量在品种间均表现极显著差异。FPKM层次聚类分析结果表明,开花后第30天红珍珠相对于开花后第30天白珍珠和开花后第45天红珍珠相对于开花后第45天白珍珠独有基因分别为1847和1843个。GO分析注释结果表明, 8条GO 通路与花青素合成密切相关,其中GO:0055114和GO:0016207两个条目分别富集到8个和7个差异表达基因。KEGG富集分析结果表明,6条代谢途径与花青素生物合成显著相关。代谢组学结果表明,差异代谢物定位到了矢车菊素、原花青素、矮牵牛素、翠雀花素、锦葵素、牡丹素及其衍生物。转录组-代谢组联合分析结果表明,类黄酮生物合成途径(ko00941)是种皮颜色形成的关键途径,翠雀花素和矢车菊素为关键差异代谢物。11个差异表达基因qRT-PCR表达趋势基本与转录组测序结果一致。本研究结果对揭示花生种皮花青素生物合成调控机制具有一定的参考意义。

    关键词:花生;花青素;转录组学;代谢组学
    Abstract:

    Peanut is the important unique export agricultural product, which occupies a vital position in agricultural development of China.In this study, two peanut varieties, Hongzhenzhu (H) and Baizhenzhu (B, the control), were used as research samples for transcriptomic-metabolomics combined analysis. At 30 and 45 days after flowering, the testa color (L value, a value, b value) and anthocyanin content of Hongzhenzhu and Baizhenzhu were extremely significantly different between varieties. FPKM hierarchical cluster analysis showed that compared with Baizhenzhu, there were 1847 and 1843 unique genes at 30 and 45 days after flowering in Hongzhenzhu, respectively. GO analysis annotation results showed there were 8 GO terms significantly related to anthocyanin synthesis. Among them, GO:0055114 and GO:0016207 had enriched with 8 (C4H、two CHS、F3′H、two FLS、F3H and PAL)and 7(two CHS、CHI、F3′H、two FLS and F3H) differential expressed geness respectively. The results of KEGG enrichment analysis showed that 6 metabolic pathways were significantly related to anthocyanin biosynthesis, respectively. Metabolomics results showed that cyanidin, procyanidin, petunidin, delphinidin, malvidin, peony (peonidin) and their derivatives were differential accumulated metabolites (DAMs). The transcriptomics-metabolomics combined analysis showed that flavonoid biosynthesis (ko00941) is the key synthetic pathway and delphin and centaurea are the key DAMs of testa color formation. The qRT-PCR result of 11 detected DEGs was consistent with the results of transcriptome sequencing. These results of this study have a certain reference significance for revealing the regulatory mechanism of anthocyanin synthesis in peanut testa.

    Key words:peanut;anthocyanins;transcriptomics;metabolomics
    参考文献
    [1] David J, Abernathy B, Seijo G, Clevenger J, Cannon S. Evaluating two different models of peanut's origin. Nature Genetics, 2020, 52(6): 557-559
    [2] Putra R, Rizkiyah N, Che A, Abdul H, Yasir H, Irianto I, Jumakir J,Waluyo W,Suparwoto S,Qomariyah L. Valorization of peanut skin as agricultural waste using various extraction methods: A review. Molecules, 2023, 28(11): 4325
    [3] Singh B, Singh U. Peanut as a source of protein for human foods. Plant Foods For Human Nutrition, 1991, 41(2): 165-77
    [4] 赵赓九, 胡晖, 刘红芝, 王强. 鲜食花生品质评价和贮藏加工研究进展. 食品科学, 2023, 44(5): 314-320Zhao G J, Hu H, Liu H Z, Wang Q. Research progress on quality evaluation, storage and processing of fresh peanuts. Food Science, 2023, 44(5): 314-320
    [5] 朱树良, 赵昆昆, 高古腔, 屈成鑫, 马莹莹, 任锐, 巩方平, 李忠峰, 马兴立, 张幸果, 殷冬梅. 花生种皮颜色智能识别模型的建立与应用. 中国油料作物学报, 2022, 44(2): 324-330Zhu S L, Zhao K K, Gao G Q, Qu C X, Ma Y Y, Ren R, Gong F P, Li Z F, Ma X L, Zhang X G, Yin D M. Establishment and application of intelligent model for peanut seed coat color recognition. Chinese Journal of Oil Crops, 2022, 44(2): 324-330
    [6] 鲁明闽, 徐艳, 王易平, 孔英珍, 胡瑞波, 周功克. 拟南芥种皮粘液质形成及调控机制研究进展. 植物生理学报, 2018, 54(8): 1288-1304Lu M M, Xu Y, Wang Y P, Kong Y Z, Hu R B, Zhou G K. Research progress on the formation and regulation mechanism of mucous in Arabidopsis seed coat. Plant Physiology Journal, 2018, 54(8): 1288-1304
    [7] Toomer T. Nutritional chemistry of the peanut (Arachis hypogaea L.). Critical Reviews in Food Science and Nutrition, 2018, 58(17): 3042-3053
    [8] 胡梦蝶, 李佳伟, 崔顺立, 侯名语, 杨鑫雷, 刘立峰, 蒋晓霞, 穆国俊. 花生花斑种皮花青素合成的转录组-代谢组联合分析. 植物遗传资源学报, 2021, 22(6): 1732-1745Hu M D, Li J W, Cui S L, Hou M Y, Yang X L, Liu L F, Jiang X Y, Mu G J. Transcriptome-metabolome analysis of anthocyanin synthesis in peanut specular seed coat . Journal of Plant Genetic Resources, 2021, 22(6): 1732-1745
    [9] Liu H, Liu Z, Wu Y, Zheng L, Zhang G. Regulatory mechanisms of anthocyanin biosynthesis in apple and pear. International Journal of Molecular Sciences, 2021, 22(16): 8441
    [10] 张惊宇, 龙雨青, 曾娟, 付学森, 何佳蔚, 周日宝, 刘湘丹. 基于代谢组及转录组学研究灰毡毛忍冬不同品种黄酮类成分差异积累的转录调控机制. 中国中药杂志, 2024, 12(6): 1-16Zhang J Y, Long Y Q, Zeng J, Fu X S, He J W, Zhou R B, Liu X D. Metabolic and transcriptomic studies on the transcriptional regulation mechanism of the differential accumulation of flavonoids in different cultivars of Lonicera japonica. Chinese Journal of Traditional Chinese Medicine, 2024, 12(6): 1-16
    [11] Shen S, Tang Y, Zhang C. Metabolite profiling and transcriptome analysis provide insight into testa color in Brassica juncea. International Journal of Molecular Sciences. 2021, 22(13): 7215
    [12] 刘淑华, 臧丹丹, 孙燕, 李金霞, 赵恒田. 花青素生物合成途径及关键酶研究进展. 土壤与作物, 2022, 11(3): 336-346Liu S H, Zang D D, Sun Y, Li J X, Zhao H T. Research advances on biosynthesis pathway of anthocyanins and relevant key enzymes. Soils and Crops, 2022, 11(3): 336-346
    [13] 孙家旗, 唐维, 刘永胜. 猕猴桃CHS基因RNA干涉载体在果实中的瞬时表达可以有效影响花青素积累. 应用与环境生物学报, 2014, 20(5): 929-933Sun J Q, Tang W, Liu Y S. Transient expression of CHS-RNVAi effectively influences the accumulation of anthocyanin in fruit of kiwifruit(Actinidia chinensis). Chinese Journal of Applied & Environmental Biology, 2014, 20(5): 929-933
    [14] 汤努尔·瓦力拜. 三叶海棠叶色变化原因分析. 杨凌: 西北农林科技大学, 2017Tonur W. Analysis on the causes of leaf color change of Malus trifoliata. Yangling: Northwest A&F University, 2017
    [15] Song C, Ring L, Hoffmann T, Huang F C, Slovin J, Schwab W. Acylphloroglucinol biosynthesis in strawberry fruit. Plant Physiology, 2015, 169(3): 1656-1670
    [16] Donoso A, Rivas C, Zamorano A, Pe?a á, Handford M, Aros D. Understanding alstroemeria pallida flower colour: Links between phenotype, anthocyanins and gene expression. Plants (Basel), 2020, 10(1): 55 .
    [17] Yamazaki M, Nakajima J, Yamanashi M, Sugiyama M, Makita Y, Springob K, Awazuhara M, Saito K. Metabolomics and differential gene expression in anthocyanin chemo-varietal forms of Perilla frutescens. Phytochemistry, 2003, 62(6): 987-995
    [18] 赵亚男, 张会灵, 张中华, 刘菊, 张菊平. 转录因子HY5在植物花青素合成中的调控作用. 植物遗传资源学报, 2022, 23(3): 670-677Zhao Y N, Zhang H L, Zhang Z H, Liu J, Zhang J P. Regulation of transcription factor HY5 in plant anthocyanin synthesis. Journal of Plant Genetic Resources, 2022, 23(3): 670-677
    [19] 李海芬, 邱金梅, 陈小平, 洪彦彬, 梁炫强. 花生花青素合成相关基因的表达与种皮颜色关系. 中国油料作物学报, 2017, 39(5): 600-605Li H F, Qiu J M, Chen X P, Hong Y B, Liang X Q. Relationship between expression of genes related to anthocyanin synthesis and seed coat color in peanut . Chinese Journal of Oil Crops, 2017, 39(5): 600-605
    [20] 赵钰涵. 花生种皮花青素积累关键基因的定位和转录组分析. 济南: 山东师范大学, 2020Zhao Y H. Mapping and transcriptome analysis of key genes for anthocyanin accumulation in peanut seed skin. Jinan: Shandong Normal University, 2020
    [21] 孙奇泽. 彩色花生生理特性、产量品质及种皮色素沉积的差异研究. 泰安: 山东农业大学, 2016Sun Q Z. Study on difference of physiological characteristics, yield and quality and seed coat pigmentation of colored peanut. Tai'an: Shandong Agricultural University, 2016
    [22] 黄春兰, 许文婷, 莫子燕, 陆强, 黄燕萍. 红心火龙果皮花青素提取工艺优化及花青素组成分析. 食品科技, 2023, 48(9): 183-191Huang C L, Xu W T, Mo Z Y, Lu Q, Huang Y P. Optimization of anthocyanin extraction process and analysis of anthocyanin composition in pericarp of red piyata. Food Science and Technology, 2023, 48(9): 183-191
    [23] Livak J, Schmittgen D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods, 2001, 25(4): 402-408
    [24] Xia H, Zhu L, Zhao C, Li K, Shang C, Hou L, Wang M, Shi J, Fan S, Wang X. Comparative transcriptome analysis of anthocyanin synthesis in black and pink peanut. Plant Signaling & Behavior, 2020, 15(2): 1721044
    [25] Kuang Q, Yu Y, Attree R, Xu B. A comparative study on anthocyanin, saponin, and oil profiles of black and red seed coat peanut (Arachis hypogacea L.) grown in China. International Journal of Food Properties, 2017, 5(3): 131-140
    [26] Wang L, Albert W, Zhang H, Arathoon S, Boase R, Ngo H, Schwinn E, Davies M, Lewis H. Temporal and spatial regulation of anthocyanin biosynthesis provide diverse flower colour intensities and patterning in Cymbidium orchid. Planta, 2014, 240(5): 983-1002
    [27] Liu J, Chuang N, Chiou Y, Chin C, Shen Q, Yeh W. Methylation effect on chalcone synthase gene expression determines anthocyanin pigmentation in floral tissues of two Oncidium orchid cultivars. Planta, 2012 ,236(2): 401-409
    [28] Mekapogu M, Vasamsetti K, Kwon K, Ahn S, Lim H, Jung A. Anthocyanins in floral colors: Biosynthesis and regulation in chrysanthemum flowers. International Journal of Molecular Sciences, 2020, 21(18): 6537
    [29] Li L, Zhai Y, Luo X, Zhan G Y, Shi Q. Comparative transcriptome analyses reveal genes related to pigmentation in the petals of red and white Primula vulgaris cultivars. Physiology and Molecular Biology of Plants, 2019, 25(4): 1029-1041
    [30] Gang R, Lavid N, Zubieta C, Chen F, Beuerle T, Lewinsohn E, Noel P, Pichersky E. Characterization of phenylpropene O-methyltransferases from sweet basil: Facile change of substrate specificity and convergent evolution within a plant O-methyltransferase family. Plant Cell, 2002, 14(2): 505-519
    [31] Ma Z H, Nan X T, Li W F, Mao J, Chen B H. Comprehensive genomic identification and expression analysis 4CL gene family in apple. Gene, 2023, 8(58):147197
    [32] Liu C Q, Yao X Q, Li G Q, Huang L, Xie Z J. Transcriptomic profiling of purple broccoli reveals light-induced anthocyanin biosynthetic signaling and structural genes. PeerJ, 2020, 8(3): 8870
    [33] 李佳伟. 紫色种皮高油酸花生品种选育及种皮色素DEGs组学分析. 保定: 河北农业大学, 2022Li J W. Breeding of peanut varieties with purple seed coat and high oleic acid and analysis of seed coat pigment DEGs. Baoding: Agricultural University of Hebei, 2022
    [34] Saruta M, Ashina H, Matsumoto T, Okubo H, Hiraoka M, Kasai A, Ohnishi S, Funatsuki H, Kawasaki M, Sano T, Senda M. A major gene for tolerance to cold-induced seed coat discoloration relieves viral seed mottling in soybean. Breeding Science, 2020, 70(4): 449-455
    [35] 邵婉璐. 野生草莓花青素合成多样性及光照对红颜草莓花青素合成的影响. 杭州: 浙江理工大学, 2018Shao W L. Anthocyanin synthesis diversity of wild strawberry and effect of light on anthocyanin synthesis of red strawberry. Hangzhou: Zhejiang Sci-Tech University, 2018
    [36] Ohno S, Hori W, Hosokawa M, Tatsuzawa F, Doi M. Post-transcriptional silencing of chalcone synthase is involved in phenotypic lability in petals and leaves of bicolor dahlia (Dahlia variabilis) 'Yuino'. Planta, 2018, 247(2): 413-428
    [37] Himi E, Nisar A, Noda K. Colour genes (R and Rc) for grain and coleoptile upregulate flavonoid biosynthesis genes in wheat. Genome, 2005, 48(4): 747-754
    [38] Lei T, Huang J, Ruan H, Qian W, Fang Z, Gu C, Zhang N, Liang Y, Wang Z, Gao L, Wang Y. Competition between FLS and DFR regulates the distribution of flavonols and proanthocyanidins in Rubus chingii Hu. Frontiers in Plant Science, 2023, 14(5): 1134993
    [39] Zhang Y, Cheng Y, Xu S, Ma H, Han J, Zhang Y. Tree peony variegated flowers show a small insertion in the F3'H gene of the acyanic flower parts. BMC Plant Biology, 2020, 20(1): 211
    [40] Wang D, Yang T, Li Y, Deng F, Dong S, Li W, He Y, Zhang J, Zou L. Light intensity-a key factor affecting flavonoid content and expression of key enzyme genes of flavonoid synthesis in Tartary Buckwheat. Plants(Basel), 2022, 11(16): 2165
    [41] Feng Y, Yang S, Li W, Mao J, Chen B, Ma Z. Genome-wide identification and expression analysis of ANS family in strawberry fruits at different coloring stages. International Journal of Molecular Sciences, 2023, 24(16): 12554
    [42] 雷雨. 转录组和代谢组联合分析鉴定花椒花青素生物合成关键基因. 杨凌: 西北农林科技大学, 2023Lei Y. Identification of key genes in anthocyanin biosynthesis of Zanthoxylum L. by combined transcriptome and metabolome analysis. Yangling: Northwest A&F University, 2023
    相似文献
    引证文献
    网友评论
    网友评论
    分享到微博
    发 布
引用本文

张利苹,王俊玲,李振华,等.花生红色种皮花青素生物合成转录-代谢组学联合分析[J].植物遗传资源学报,2024,25(10):1767-1780.

复制
相关视频

分享

微信扫一扫:分享

微信里点“发现”,扫一下

二维码便可将本文分享至朋友圈。

文章指标
  • 点击次数:141
  • 下载次数: 1374
  • HTML阅读次数: 47
  • 引用次数: 0
历史
  • 收稿日期:2023-12-15
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2024-10-09
  • 出版日期:
文章二维码
您是第5916105位访问者
ICP:京ICP备09069690号-23
京ICP备09069690号-23
植物遗传资源学报 ® 2025 版权所有
技术支持:北京勤云科技发展有限公司
请使用 Firefox、Chrome、IE10、IE11、360极速模式、搜狗极速模式、QQ极速模式等浏览器,其他浏览器不建议使用!