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Home > Archive>Volume 20, Issue 5, 2019 >1278-1288. DOI:10.13430/j.cnki.jpgr.20190130001
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Development and Application of Eggplant InDel Markers Based on Whole Genome Re-sequencing Datasets
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1.Guangdong Vegetable Engineering and Technology Research Center/ College of Horticulture, South China Agricultural University;2.The Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences

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    Abstract:

    In this study, 151327 of InDels were in silico identified by taking advantage of whole genome re-sequencing of two eggplant (Solanum melongena) lines. The primers targeting 180 InDel loci were developed, which were subjected in tests of two re-sequencing eggplant lines and derived hybrid line. Out of that, sixty-two (34.7%) of total primers were polymorphic between both varieties. In addition, the genetic diversity and specificity of 24 eggplant lines and 143 varieties were investigated by use of these markers. The results from purity test of variety from two InDel markers matched well with those from field experiments.

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History
  • Received:January 30,2019
  • Revised:March 12,2019
  • Adopted:March 25,2019
  • Online: September 17,2019
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